Publications

Publications (Ph.D.):

1. Farhan Tanvir, Khaled Mohammed Saifuddin, Tanvir Hossain, Arunkumar Bagavathi, and Esra Akbas. "HeTAN: Heterogeneous Graph Triplet Attention Network for Drug Repurposing" (DSAA'24)

2.  Farhan Tanvir, Khaled Mohammed Saifuddin, Muhammad Ifte Khairul Islam, and Esra Akbas. "DDI Prediction with Heterogeneous    Information         Network - Meta-Path Based Approach." (IEEE/ACM Transactions on Computational Biology and Bioinformatics. )

3.  Tanvir Hossain, Khaled Mohammed Saifuddin, Muhammad Ifte Khairul Islam,  Farhan Tanvir, and Esra Akbas. "Tackling                                       Oversmoothing in GNN via Graph Sparsification." (ECML PKDD'24)

4.  Khaled Mohammed Saifuddin, Corey May, Farhan Tanvir, Muhammad Ifte Khairul Islam, and Esra Akbas. "Seq-HyGAN: Sequence Classification via Hypergraph Attention Network." (ACM CIKM'23 and MLG @ KDD'23)

5.  Khaled Mohammed Saifuddin, Esra Akbas, "Topology-guided Hypergraph Transformer Network: Unveiling Structural Insights for Improved Representations" (PhD Consortium @ KDD'23)

6. Muhammad Ifte Khairul Islam, Khaled Mohammed Saifuddin, Tanvir Hossain, Esra Akbas, "DyGL: Dynamic Graph Learning For Event Prediction"(PhD Consortium @ KDD'23)

7. Farhan Tanvir, Khaled Mohammed Saifuddin, Esra Akbas, "HeTriNet: Heterogeneous Graph Triplet Attention Network for Drug Repurposing" (PhD Consortium @ KDD'23)

8.  Khaled Mohammed Saifuddin, Bri Bumgardnerr, Farhan Tanvir, and Esra Akbas. "HyGNN: Drug-Drug Interaction Prediction via Hypergraph Neural Network." In 2023 IEEE International Conference on Data Engineering (ICDE’23)

9. Tanvir, Farhan, Khaled Mohammed Saifuddin, and Esra Akbas. "DDI Prediction via Heterogeneous Graph Attention Networks." arXiv preprint arXiv:2207.05672 (2022). In the 21st International Workshop on Data Mining on Bioinformatics (ACM-BCB'23 and BioKDD’22)

10. Khaled Mohammed Saifuddin, Muhammad Ifte Khairul Islam, and Esra Akbas. "Drug Abuse Detection in Twitter-sphere: Graph-Based Approach." In 2021 IEEE International Conference on Big Data (Big Data), pp. 4136-4145. IEEE, 2021. (IEEE BigData-21)

11. Khaled Mohammed Saifuddin, Esra Akbas, Max Khanov, and Jason Beaman. "Effects of COVID-19 on individuals in Opioid Addiction Recovery." In 2021 20th IEEE International Conference on Machine Learning and Applications (ICMLA), pp. 1333-1340. IEEE, 2021. (ICMLA-21)

12.  Bumgardner, Bri, Farhan Tanvir, Khaled Mohammed Saifuddin, and Esra Akbas. "Drug-Drug Interaction Prediction: a Purely SMILES Based Approach." In 2021 IEEE International Conference on Big Data (Big Data), pp. 5571-5579. IEEE, 2021. (IEEE BigData-21)

Publications (Undergrad):

7.      Hossen, Md Sahadat, Mahmuda Akter, and Khaled Mohammed Saifuddin. "Automatic Digit and Alphabet Recognition Based Online Toll Collection System." In 2021 International Conference on Information and Communication Technology for Sustainable Development (ICICT4SD), pp. 189-194. IEEE, 2021.

8.      Khaled Mohammed Saifuddin, Abu Jobayer Bin Ali, Abu Shakil Ahmed, Sk Shariful Alam, and Abu Saleh Ahmad. "Watchdog and Pathrater based intrusion detection system for MANET." In 2018 4th International Conference on Electrical Engineering and Information & Communication Technology (iCEEiCT), pp. 168-173. IEEE, 2018.

9.      Ahmed, Abu Shakil, Sharmina Rahman, Khaled Mohammed Saifuddin, and Mohammad Shaifur Rahman. "Simplistic Approach to Design an Affordable Prototype of Object Finding Device." In 2018 International Conference on Computer, Communication, Chemical, Material and Electronic Engineering (IC4ME2), pp. 1-4. IEEE, 2018.

10.    Khaled Mohammed Saifuddin, Kazi Fahid Reza, Masud An Nur Islam Fahim, and Sk Shariful Alam. "Detection of primary user emulation attack in cognitive radio environment." In 2017 6th International Conference on Informatics, Electronics and Vision & 2017 7th International Symposium in Computational Medical and Health Technology (ICIEV-ISCMHT), pp. 1-4. IEEE, 2017.Performance analysis of cognitive radio: Netsim viewpoint

11.   Ahmed, Abu Shakil, and Khaled Mohammed Saifuddin. "A Simplistic, Effective, and Adaptive Approach towards Classifying Medical Records according to ICD-10 using Machine Learning for Efficient Statistics." In 2017 2nd International Conference on Electrical & Electronic Engineering (ICEEE), pp. 1-4. IEEE, 2017.

12.   Khaled Mohammed Saifuddin, Abu Shakil Ahmed, Kazi Fahid Reza, Sk Shariful Alam, and Sharmina Rahman. "Performance analysis of cognitive radio: Netsim viewpoint." In 2017 3rd International Conference on Electrical Information and Communication Technology (EICT), pp. 1-6. IEEE, 2017.

13.   Ahmed, Sabbir, Khaled Mohammed Saifuddin, Abu Shakil Ahmed, ABM Aowlad Hossain, and Md Taslim Iqbal. "Identification and volume estimation of dental caries using CT image." In 2017 IEEE International Conference on Telecommunications and Photonics (ICTP), pp. 48-51. IEEE, 2017.